EnhancerDB
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  3. rs540285932[chr1:235036934]
Enhancers that have rs540285932[chr1:235036934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540285932[chr1:235036934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235036824 235037181 ZNF274 GTRD no Blood (GM12878) 21400154
chr1 235036919 235036940 IRF1 JASPAR yes 36327847
chr1 235036922 235036936 STAT1 JASPAR yes 36327848
chr1 235036923 235036944 IRF1 JASPAR yes 36327849
chr1 235036924 235036939 FOXP1 JASPAR yes 36327850
chr1 235036924 235036945 IRF1 JASPAR yes 36327851
chr1 235036925 235036946 IRF1 JASPAR yes 36327852
chr1 235036926 235036941 FOXP1 JASPAR yes 36327853
chr1 235036926 235036947 IRF1 JASPAR yes 36327854
chr1 235036928 235036943 FOXP1 JASPAR yes 36327855
chr1 235036929 235036944 FOXP1 JASPAR yes 36327856
chr1 235036930 235036945 FOXP1 JASPAR yes 36327857
chr1 235036930 235036951 IRF1 JASPAR yes 36327858
chr1 235036931 235036946 FOXP1 JASPAR yes 36327859
chr1 235036931 235036952 IRF1 JASPAR yes 36327860
chr1 235036932 235036947 FOXP1 JASPAR yes 36327861
chr1 235036932 235036953 IRF1 JASPAR yes 36327862
chr1 235036933 235036954 IRF1 JASPAR yes 36327863
Genes associated with rs540285932[chr1:235036934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More