EnhancerDB
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  3. rs540295982[chr2:121671022]
Enhancers that have rs540295982[chr2:121671022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540295982[chr2:121671022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121671017 121671032 SCRT1 JASPAR yes 76588094
chr2 121671018 121671028 FIGLA JASPAR yes 76588095
chr2 121671018 121671028 SREBF2 JASPAR yes 76588096
chr2 121671018 121671028 TFAP4 JASPAR yes 76588097
chr2 121671019 121671032 SCRT2 JASPAR yes 76588098
chr2 121671020 121671025 USF2 TRANSFAC yes 76588099
chr2 121671020 121671041 IRF1 JASPAR yes 76588100
chr2 121671021 121671027 PTF TRANSFAC yes 76588101
Genes associated with rs540295982[chr2:121671022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More