EnhancerDB
  1. Home
  2. SNP
  3. rs540339898[chr12:66629460]
Enhancers that have rs540339898[chr12:66629460]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 66624065 66637874 enh43760
Esophagus Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540339898[chr12:66629460]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66628873 66629475 ZNF274 GTRD no Liver (HepG2) 108042756
chr12 66629043 66630319 ZNF274 GTRD no Blood (GM12878) 21553573
chr12 66629043 66630319 ZNF274 GTRD no Blood (GM12878) 108042760
chr12 66629113 66630169 ZNF274 GTRD no Blood (GM12878) 21553575
chr12 66629113 66630169 ZNF274 GTRD no Blood (GM12878) 108042764
chr12 66629160 66630140 ZNF274 GTRD no Blood (GM12878) 21553576
chr12 66629160 66630140 ZNF274 GTRD no Blood (GM12878) 108042767
chr12 66629256 66630002 ZNF274 GTRD no Liver (HepG2) 108042769
chr12 66629261 66630246 ZNF274 GTRD no Blood (GM12878) 21553577
chr12 66629261 66630246 ZNF274 GTRD no Blood (GM12878) 108042771
chr12 66629449 66629460 FOXB1 JASPAR yes 121522714
chr12 66629455 66629460 TBP TRANSFAC yes 121522716
chr12 66629456 66629471 PRDM1 JASPAR yes 121522717
Genes associated with rs540339898[chr12:66629460], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More