EnhancerDB
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  3. rs540340611[chr5:78049802]
Enhancers that have rs540340611[chr5:78049802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540340611[chr5:78049802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78049789 78049804 RFX5 JASPAR yes 63621823
Genes associated with rs540340611[chr5:78049802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More