EnhancerDB
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  3. rs540346690[chr9:34185853]
Enhancers that have rs540346690[chr9:34185853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 34182234 34195995 enh10715
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540346690[chr9:34185853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 34185838 34185853 MEF2C JASPAR yes 83830572
chr9 34185841 34185862 IRF1 JASPAR yes 83830573
chr9 34185845 34185860 STAT2 JASPAR yes 83830574
chr9 34185846 34185861 FOXP1 JASPAR yes 83830575
chr9 34185850 34185865 FOXP1 JASPAR yes 83830576
chr9 34185851 34185862 FOXA1 JASPAR yes 83830577
chr9 34185851 34185866 FOXA1 JASPAR yes 83830578
chr9 34185852 34185864 FOXC2 JASPAR yes 83830579
chr9 34185852 34185872 RREB1 JASPAR yes 83830580
chr9 34185853 34185865 FOXI1 JASPAR yes 83830581
chr9 34185853 34185873 RREB1 JASPAR yes 83830582
Genes associated with rs540346690[chr9:34185853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More