EnhancerDB
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  3. rs540357232[chr17:29820192]
Enhancers that have rs540357232[chr17:29820192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540357232[chr17:29820192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29820068 29820584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750074
chr17 29820068 29820584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249398
chr17 29820103 29820787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750075
chr17 29820103 29820787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249399
chr17 29820126 29820536 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750076
chr17 29820126 29820536 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249400
chr17 29820138 29820658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750077
chr17 29820138 29820658 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249401
chr17 29820164 29820600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750078
chr17 29820164 29820600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108249402
chr17 29820183 29820199 POU4F2 JASPAR yes 53842211
chr17 29820184 29820200 POU4F3 JASPAR yes 53842212
chr17 29820186 29820200 POU4F1 JASPAR yes 53842214
chr17 29820190 29820200 GSX2 JASPAR yes 53842215
chr17 29820190 29820200 LBX2 JASPAR yes 53842216
chr17 29820190 29820200 MIXL1 JASPAR yes 53842217
chr17 29820190 29820200 MNX1 JASPAR yes 53842218
chr17 29820190 29820200 RAX JASPAR yes 53842219
chr17 29820191 29820199 ISX JASPAR yes 53842220
chr17 29820191 29820199 LHX9 JASPAR yes 53842221
chr17 29820191 29820199 LMX1B JASPAR yes 53842222
chr17 29820191 29820199 PRRX1 JASPAR yes 53842223
chr17 29820191 29820199 RAX2 JASPAR yes 53842224
chr17 29820191 29820199 SHOX JASPAR yes 53842225
chr17 29820191 29820199 UNCX JASPAR yes 53842226
Genes associated with rs540357232[chr17:29820192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More