EnhancerDB
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  3. rs540359052[chr12:53763493]
Enhancers that have rs540359052[chr12:53763493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs540359052[chr12:53763493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53763488 53763493 SP1 TRANSFAC yes 120983190
chr12 53763489 53763494 SP1 TRANSFAC yes 120983191
chr12 53763489 53763498 THAP1 JASPAR yes 120983192
chr12 53763492 53763496 LFA1 TRANSFAC yes 120983193
Genes associated with rs540359052[chr12:53763493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More