EnhancerDB
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  3. rs540366186[chr16:21527955]
Enhancers that have rs540366186[chr16:21527955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540366186[chr16:21527955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21522750 21528364 ZNF274 GTRD no Liver (HepG2) 21696708
chr16 21524823 21528217 ZNF274 GTRD no Liver (HepG2) 21696796
chr16 21526501 21528293 ZNF274 GTRD no Liver (HepG2) 21696900
chr16 21526585 21528198 ZNF274 GTRD no Liver (HepG2) 21696902
chr16 21526639 21528211 ZNF274 GTRD no Bone Marrow (K562) 21696909
chr16 21527336 21528550 ZNF143 GTRD no Epithelial (MCF-7) 21696928
chr16 21527351 21528479 ZNF143 GTRD no Epithelial (MCF-7) 21696929
chr16 21527420 21528353 ZNF143 GTRD no Epithelial (MCF-7) 21696930
chr16 21527512 21528386 ZNF143 GTRD no Epithelial (MCF-7) 21696931
chr16 21527563 21528253 ZNF143 GTRD no Epithelial (MCF-7) 21696932
chr16 21527567 21528161 ZNF143 GTRD no Epithelial (MCF-7) 21696933
chr16 21527594 21528079 ZNF274 GTRD no Bone Marrow (K562) 21696934
chr16 21527649 21528252 ZNF143 GTRD no Epithelial (MCF-7) 21696935
chr16 21527672 21528127 TCF7L2 GTRD no Colon (HCT116) 21696936
chr16 21527767 21528223 ZNF274 GTRD no Bone Marrow (K562) 21696937
chr16 21527795 21528164 ZNF274 GTRD no Bone Marrow (K562) 21696938
chr16 21527801 21528152 ZNF274 GTRD no Bone Marrow (K562) 21696939
chr16 21527955 21527976 IRF1 JASPAR yes 9929058
chr16 21527955 21528612 ZNF274 GTRD no Liver (HepG2) 21696940
Genes associated with rs540366186[chr16:21527955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More