EnhancerDB
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  3. rs540384667[chr1:235004839]
Enhancers that have rs540384667[chr1:235004839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540384667[chr1:235004839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235003374 235005642 ZNF274 GTRD no Blood (GM12878) 21399290
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 21399291
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883393
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883394
chr1 235003432 235016952 ZNF274 GTRD no Blood (GM12878) 107883395
chr1 235003617 235007533 ZNF274 GTRD no Blood (GM12878) 21399292
chr1 235003847 235005523 ZNF274 GTRD no Blood (GM12878) 21399293
chr1 235003948 235005510 ZNF274 GTRD no Blood (GM12878) 21399294
chr1 235004016 235005549 ZNF274 GTRD no Blood (GM12878) 21399295
chr1 235004270 235005675 ZNF274 GTRD no Blood (GM12878) 21399297
chr1 235004352 235004983 ZNF274 GTRD no Bone Marrow (K562) 21399298
chr1 235004380 235005842 ZNF274 GTRD no Blood (GM12878) 21399302
chr1 235004386 235005556 ZNF274 GTRD no Blood (GM12878) 21399303
chr1 235004438 235005478 ZNF274 GTRD no Blood (GM12878) 21399305
chr1 235004728 235005360 ZNF274 GTRD no Blood (GM12878) 21399306
chr1 235004791 235005248 ZNF274 GTRD no Blood (GM12878) 21399307
chr1 235004799 235005435 ZNF274 GTRD no Blood (GM12878) 21399308
chr1 235004801 235005305 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21399309
chr1 235004813 235005425 ZNF274 GTRD no Blood (GM12878) 21399310
chr1 235004820 235004841 IRF1 JASPAR yes 36323368
chr1 235004821 235005478 ZNF274 GTRD no Blood (GM12878) 21399311
chr1 235004832 235004847 FOXP1 JASPAR yes 36323369
chr1 235004834 235005347 ZNF274 GTRD no Blood (GM12878) 21399312
chr1 235004835 235004840 GATA2 JASPAR yes 36323370
Genes associated with rs540384667[chr1:235004839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More