EnhancerDB
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  3. rs540385486[chr12:110749537]
Enhancers that have rs540385486[chr12:110749537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110736965 110760635 enh14987
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540385486[chr12:110749537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110749530 110749539 SRY JASPAR yes 123691463
chr12 110749534 110749549 FOXP1 JASPAR yes 123691464
chr12 110749535 110749550 FOXP1 JASPAR yes 123691465
chr12 110749536 110749542 TBP TRANSFAC yes 123691466
chr12 110749536 110749551 FOXP1 JASPAR yes 123691467
chr12 110749537 110749552 FOXP1 JASPAR yes 123691468
chr12 110749537 110749558 IRF1 JASPAR yes 123691469
Genes associated with rs540385486[chr12:110749537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More