EnhancerDB
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  3. rs540388188[chr17:25805655]
Enhancers that have rs540388188[chr17:25805655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 25805507 25805777 vista24263
VISTA
Transcript factors that have rs540388188[chr17:25805655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25805647 25805662 HNF4G JASPAR yes 21211847
chr17 25805647 25805662 HNF4G JASPAR yes 53634647
chr17 25805648 25805662 NR2F1 JASPAR yes 21211848
chr17 25805648 25805662 NR2F1 JASPAR yes 53634648
chr17 25805648 25805663 HNF4A JASPAR yes 21211849
chr17 25805648 25805663 HNF4A JASPAR yes 53634649
Genes associated with rs540388188[chr17:25805655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More