EnhancerDB
  1. Home
  2. SNP
  3. rs540393619[chr3:186685318]
Enhancers that have rs540393619[chr3:186685318]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540393619[chr3:186685318]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186685313 186685318 TFAP2A TRANSFAC yes 8364809
chr3 186685313 186685319 MZF1 JASPAR yes 8364810
Genes associated with rs540393619[chr3:186685318], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More