EnhancerDB
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  3. rs540418376[chr11:65269471]
Enhancers that have rs540418376[chr11:65269471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540418376[chr11:65269471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979933
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979934
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979935
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494448
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494449
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979937
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979938
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979939
chr11 65266467 65271002 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21494915
chr11 65267337 65275736 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21494952
chr11 65267337 65275736 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107980236
chr11 65267379 65270019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21494953
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21494954
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21494955
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107980237
chr11 65267392 65269965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21494956
chr11 65267435 65269829 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21494958
chr11 65268725 65269848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495033
chr11 65268894 65270052 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495035
chr11 65268938 65269822 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495038
chr11 65268959 65269475 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21495042
chr11 65268997 65269974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495048
chr11 65269017 65269517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495051
chr11 65269103 65269579 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495057
chr11 65269125 65269701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495058
chr11 65269131 65269547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495059
chr11 65269237 65269801 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495060
chr11 65269263 65269767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495061
chr11 65269265 65269645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495062
chr11 65269279 65269615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495063
chr11 65269383 65269599 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495064
chr11 65269406 65269842 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495065
chr11 65269423 65269859 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495066
chr11 65269434 65269844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495067
chr11 65269442 65269786 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495068
chr11 65269447 65269629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495069
chr11 65269450 65269770 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495070
chr11 65269451 65269771 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495071
chr11 65269456 65269656 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495072
chr11 65269469 65269479 NFIA JASPAR yes 39324665
chr11 65269470 65269479 NFIX JASPAR yes 39324666
chr11 65269471 65269477 NFIC JASPAR yes 39324667
Genes associated with rs540418376[chr11:65269471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More