EnhancerDB
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  3. rs540423280[chr16:87505754]
Enhancers that have rs540423280[chr16:87505754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540423280[chr16:87505754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87505746 87505767 IRF1 JASPAR yes 12219804
chr16 87505749 87505763 IRF8 JASPAR yes 12219805
chr16 87505750 87505765 PRDM1 JASPAR yes 12219806
chr16 87505750 87505768 IRF2 JASPAR yes 12219807
chr16 87505751 87505763 IRF1 JASPAR yes 12219808
Genes associated with rs540423280[chr16:87505754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More