EnhancerDB
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  3. rs540425564[chr16:89554135]
Enhancers that have rs540425564[chr16:89554135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs540425564[chr16:89554135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89554132 89554143 CEBPB JASPAR yes 12350286
chr16 89554133 89554143 CEBPB JASPAR yes 12350287
chr16 89554133 89554143 CEBPD JASPAR yes 12350288
chr16 89554133 89554143 CEBPE JASPAR yes 12350289
chr16 89554133 89554143 CEBPG JASPAR yes 12350290
Genes associated with rs540425564[chr16:89554135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More