EnhancerDB
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  3. rs540428947[chr17:44261459]
Enhancers that have rs540428947[chr17:44261459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 44251445 44267655 enh4436
Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs540428947[chr17:44261459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 44260438 44262335 ZNF274 GTRD no Bone Marrow (K562) 108265788
chr17 44260975 44261978 ZNF143 GTRD no Epithelial (MCF-7) 108265789
chr17 44261336 44261972 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21765676
chr17 44261336 44261972 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108265790
chr17 44261368 44262028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21765677
chr17 44261368 44262028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108265791
chr17 44261391 44262229 ZNF274 GTRD no Bone Marrow (K562) 108265792
chr17 44261448 44261459 RUNX1 JASPAR yes 54488880
chr17 44261448 44261462 FOXF2 JASPAR yes 54488881
chr17 44261452 44261466 POU4F1 JASPAR yes 54488882
chr17 44261452 44261467 HNF1A JASPAR yes 54488883
chr17 44261453 44261466 HNF1B JASPAR yes 54488884
chr17 44261453 44261467 POU4F1 JASPAR yes 54488885
chr17 44261453 44261469 POU4F2 JASPAR yes 54488886
chr17 44261453 44261469 POU4F3 JASPAR yes 54488887
chr17 44261454 44261466 HNF1B JASPAR yes 54488888
chr17 44261458 44261462 YY1 TRANSFAC yes 54488889
Genes associated with rs540428947[chr17:44261459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More