EnhancerDB
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  3. rs540457079[chr17:55616106]
Enhancers that have rs540457079[chr17:55616106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540457079[chr17:55616106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55616104 55616116 BHLHE23 JASPAR yes 54966288
chr17 55616105 55616115 BHLHE22 JASPAR yes 54966289
chr17 55616105 55616115 OLIG1 JASPAR yes 54966290
chr17 55616105 55616115 OLIG2 JASPAR yes 54966291
chr17 55616105 55616115 OLIG3 JASPAR yes 54966292
Genes associated with rs540457079[chr17:55616106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More