EnhancerDB
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  3. rs540470774[chr1:212081924]
Enhancers that have rs540470774[chr1:212081924]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs540470774[chr1:212081924]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212081666 212082326 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377440
chr1 212081707 212082227 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377441
chr1 212081716 212082236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377442
chr1 212081734 212082030 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377443
chr1 212081798 212082088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377444
chr1 212081823 212082076 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377445
chr1 212081847 212082087 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377446
chr1 212081856 212082136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377447
chr1 212081860 212082064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21377448
chr1 212081904 212081992 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377449
chr1 212081910 212081928 NR3C1 JASPAR yes 35089811
chr1 212081916 212082070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377450
Genes associated with rs540470774[chr1:212081924], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More