EnhancerDB
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  3. rs540485279[chr3:56886517]
Enhancers that have rs540485279[chr3:56886517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540485279[chr3:56886517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56886501 56886519 ESR2 JASPAR yes 2603531
chr3 56886510 56886524 RORA JASPAR yes 2603532
Genes associated with rs540485279[chr3:56886517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More