EnhancerDB
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  3. rs540500002[chr6:25019433]
Enhancers that have rs540500002[chr6:25019433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs540500002[chr6:25019433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25019427 25019439 TAL1 JASPAR yes 100814488
Genes associated with rs540500002[chr6:25019433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More