EnhancerDB
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  3. rs540500719[chr6:35327063]
Enhancers that have rs540500719[chr6:35327063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540500719[chr6:35327063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35327043 35327064 ZNF263 JASPAR yes 101275805
chr6 35327044 35327065 ZNF263 JASPAR yes 101275806
chr6 35327046 35327067 ZNF263 JASPAR yes 101275807
chr6 35327053 35327074 ZNF263 JASPAR yes 101275808
chr6 35327054 35327064 SP1 JASPAR yes 101275809
chr6 35327056 35327077 ZNF263 JASPAR yes 101275810
chr6 35327057 35327067 MZF1 JASPAR yes 101275811
chr6 35327057 35327077 RREB1 JASPAR yes 101275812
chr6 35327059 35327079 RREB1 JASPAR yes 101275813
chr6 35327063 35327073 SREBF1 JASPAR yes 101275814
Genes associated with rs540500719[chr6:35327063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More