EnhancerDB
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  3. rs540505429[chr19:13287072]
Enhancers that have rs540505429[chr19:13287072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540505429[chr19:13287072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13286373 13287102 TCF7L2 GTRD no Colon (HCT116) 21851485
chr19 13287071 13287077 TBP TRANSFAC yes 112516204
Genes associated with rs540505429[chr19:13287072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More