EnhancerDB
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  3. rs540506022[chr17:2860437]
Enhancers that have rs540506022[chr17:2860437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540506022[chr17:2860437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2860420 2860441 IRF1 JASPAR yes 52789698
chr17 2860421 2860442 IRF1 JASPAR yes 52789700
chr17 2860422 2860437 FOXP1 JASPAR yes 52789701
chr17 2860424 2860439 FOXP1 JASPAR yes 52789702
chr17 2860425 2860446 IRF1 JASPAR yes 52789703
chr17 2860426 2860441 FOXP1 JASPAR yes 52789704
chr17 2860426 2860447 IRF1 JASPAR yes 52789705
chr17 2860427 2860448 IRF1 JASPAR yes 52789706
chr17 2860431 2860446 FOXP1 JASPAR yes 52789707
chr17 2860431 2860452 IRF1 JASPAR yes 52789708
chr17 2860432 2860447 FOXP1 JASPAR yes 52789709
Genes associated with rs540506022[chr17:2860437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More