EnhancerDB
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  3. rs540510218[chr16:89407130]
Enhancers that have rs540510218[chr16:89407130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540510218[chr16:89407130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89406056 89407212 AR GTRD no Prostate (PC-3) 21738285
chr16 89406056 89407212 AR GTRD no Prostate (PC-3) 108225746
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 21738286
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 108225747
chr16 89406128 89407235 ZNF274 GTRD no Bone Marrow (K562) 21738287
chr16 89406128 89407235 ZNF274 GTRD no Bone Marrow (K562) 108225748
chr16 89406212 89407246 TCF7L2 GTRD no Colon (HCT116) 21738292
chr16 89406212 89407246 TCF7L2 GTRD no Colon (HCT116) 108225753
chr16 89406218 89407187 TCF7L2 GTRD no Colon (HCT116) 21738293
chr16 89406218 89407187 TCF7L2 GTRD no Colon (HCT116) 108225754
chr16 89407123 89407132 NKX2-8 JASPAR yes 12333575
chr16 89407123 89407133 NKX2-3 JASPAR yes 12333576
Genes associated with rs540510218[chr16:89407130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More