EnhancerDB
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  3. rs540516218[chr11:13122899]
Enhancers that have rs540516218[chr11:13122899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 13110005 13145006 enh28608
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs540516218[chr11:13122899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 13122887 13122901 PLAG1 JASPAR yes 37503929
chr11 13122894 13122899 SP1 TRANSFAC yes 37503930
chr11 13122895 13122900 SP1 TRANSFAC yes 37503931
chr11 13122898 13122903 SP1 TRANSFAC yes 37503932
Genes associated with rs540516218[chr11:13122899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More