EnhancerDB
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  3. rs540516679[chr5:150461391]
Enhancers that have rs540516679[chr5:150461391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150446018 150466235 enh22725
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs540516679[chr5:150461391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150461387 150461397 RELA JASPAR yes 66911065
chr5 150461387 150461397 REL JASPAR yes 66911066
chr5 150461387 150461398 NFKB1 JASPAR yes 66911067
chr5 150461390 150461395 H4TF1 TRANSFAC yes 66911068
chr5 150461391 150461399 FEV JASPAR yes 66911069
Genes associated with rs540516679[chr5:150461391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More