EnhancerDB
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  3. rs540528760[chr16:85362634]
Enhancers that have rs540528760[chr16:85362634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540528760[chr16:85362634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85360640 85362728 ZNF274 GTRD no Bone Marrow (K562) 21723650
chr16 85361571 85362759 ZNF274 GTRD no Bone Marrow (K562) 21723672
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85362402 85362835 ZNF143 GTRD no Epithelial (MCF-7) 21723719
chr16 85362411 85362795 ZNF143 GTRD no Epithelial (MCF-7) 21723720
chr16 85362559 85362779 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723721
chr16 85362569 85364020 TCF7L2 GTRD no Colon (HCT116) 21723722
chr16 85362620 85363060 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723723
chr16 85362622 85362637 NR2C2 JASPAR yes 12048206
chr16 85362624 85362639 JUND JASPAR yes 12048207
chr16 85362625 85362638 JUN JASPAR yes 12048208
chr16 85362628 85362641 NR2F1 JASPAR yes 12048209
chr16 85362629 85362637 CREB1 JASPAR yes 12048210
chr16 85362632 85362636 ESR1 TRANSFAC yes 12048211
Genes associated with rs540528760[chr16:85362634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More