EnhancerDB
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  3. rs540528871[chr7:97909413]
Enhancers that have rs540528871[chr7:97909413]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 97901885 97919594 enh24354
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs540528871[chr7:97909413]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 97909398 97909413 RUNX2 JASPAR yes 16640487
chr7 97909411 97909421 ID4 JASPAR yes 16640488
chr7 97909411 97909421 TCF3 JASPAR yes 16640489
chr7 97909411 97909421 TCF4 JASPAR yes 16640490
chr7 97909412 97909421 SNAI2 JASPAR yes 16640491
chr7 97909413 97909418 USF2 TRANSFAC yes 16640492
chr7 97909413 97909427 PLAG1 JASPAR yes 16640493
Genes associated with rs540528871[chr7:97909413], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More