EnhancerDB
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  3. rs540546020[chr3:58324787]
Enhancers that have rs540546020[chr3:58324787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs540546020[chr3:58324787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58324778 58324790 TEF JASPAR yes 2686643
chr3 58324781 58324789 FOXL1 JASPAR yes 2686644
chr3 58324785 58324789 YY1 TRANSFAC yes 2686645
Genes associated with rs540546020[chr3:58324787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More