EnhancerDB
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  3. rs540548708[chr17:76352027]
Enhancers that have rs540548708[chr17:76352027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540548708[chr17:76352027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76351119 76352549 ZNF274 GTRD no Liver (HepG2) 21793759
chr17 76351180 76355568 ZNF274 GTRD no Liver (HepG2) 21793760
chr17 76351222 76352572 ZNF274 GTRD no Liver (HepG2) 21793761
chr17 76351286 76352316 ZNF274 GTRD no Liver (HepG2) 21793765
chr17 76351293 76352038 ZNF143 GTRD no Epithelial (MCF-7) 21793766
chr17 76351303 76352268 ZNF143 GTRD no Epithelial (MCF-7) 21793768
chr17 76351306 76352309 ZNF274 GTRD no Liver (HepG2) 21793769
chr17 76351321 76352336 ZNF274 GTRD no Liver (HepG2) 21793771
chr17 76351334 76352502 ZNF274 GTRD no Liver (HepG2) 21793773
chr17 76351354 76352358 ZNF274 GTRD no Liver (HepG2) 21793775
chr17 76351360 76352116 ZNF143 GTRD no Epithelial (MCF-7) 21793776
chr17 76351360 76352452 ZNF274 GTRD no Liver (HepG2) 21793777
chr17 76351366 76355253 ZNF274 GTRD no Liver (HepG2) 21793779
chr17 76351367 76352227 ZNF274 GTRD no Liver (HepG2) 21793781
chr17 76351374 76352203 ZNF274 GTRD no Liver (HepG2) 21793783
chr17 76351375 76352212 ZNF274 GTRD no Liver (HepG2) 21793784
chr17 76351380 76352094 ZNF143 GTRD no Epithelial (MCF-7) 21793785
chr17 76351385 76352061 ZNF143 GTRD no Epithelial (MCF-7) 21793786
chr17 76351401 76352086 ZNF143 GTRD no Epithelial (MCF-7) 21793788
chr17 76351419 76352183 ZNF274 GTRD no Liver (HepG2) 21793789
chr17 76351431 76352456 ZNF274 GTRD no Liver (HepG2) 21793791
chr17 76351508 76352398 ZNF274 GTRD no Liver (HepG2) 21793794
chr17 76351545 76352566 ZNF274 GTRD no Bone Marrow (K562) 21793798
chr17 76351623 76352085 ZNF143 GTRD no Epithelial (MCF-7) 21793799
chr17 76351803 76352027 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793800
chr17 76351806 76352208 ZNF274 GTRD no Liver (HepG2) 21793801
chr17 76351818 76352108 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793802
chr17 76351833 76352113 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793803
chr17 76351926 76352126 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21793804
chr17 76352018 76352036 ESR2 JASPAR yes 56152059
chr17 76352021 76352031 MAX JASPAR yes 56152061
chr17 76352021 76352032 USF2 JASPAR yes 56152062
chr17 76352021 76352033 HES5 JASPAR yes 56152063
chr17 76352021 76352033 HES7 JASPAR yes 56152064
chr17 76352021 76352035 TLX1 JASPAR yes 56152065
chr17 76352022 76352032 BHLHE40 JASPAR yes 56152066
chr17 76352022 76352032 HEY1 JASPAR yes 56152067
chr17 76352022 76352032 HEY2 JASPAR yes 56152068
chr17 76352022 76352032 MAX JASPAR yes 56152069
chr17 76352022 76352032 MLX JASPAR yes 56152070
chr17 76352022 76352032 MNT JASPAR yes 56152071
chr17 76352022 76352032 TFE3 JASPAR yes 56152072
chr17 76352022 76352032 TFEB JASPAR yes 56152073
chr17 76352022 76352033 USF1 JASPAR yes 56152074
chr17 76352022 76352033 USF2 JASPAR yes 56152075
chr17 76352023 76352033 MAX JASPAR yes 56152076
chr17 76352024 76352029 MYC TRANSFAC yes 56152077
chr17 76352024 76352029 USF1 TRANSFAC yes 56152078
chr17 76352024 76352029 USF2 TRANSFAC yes 56152079
chr17 76352024 76352031 USF1 JASPAR yes 56152080
Genes associated with rs540548708[chr17:76352027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More