EnhancerDB
  1. Home
  2. SNP
  3. rs540550442[chr1:229197386]
Enhancers that have rs540550442[chr1:229197386]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229191845 229208275 enh12759
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Blood (T-cell) Esophagus Liver Lung (A549) Stomach Placenta Thyroid Uterus Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs540550442[chr1:229197386]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229197304 229197939 ZNF143 GTRD no Epithelial (MCF-7) 21389654
chr1 229197365 229197386 ZNF263 JASPAR yes 35956643
chr1 229197366 229197387 ZNF263 JASPAR yes 35956645
chr1 229197369 229197390 ZNF263 JASPAR yes 35956646
chr1 229197370 229197391 ZNF263 JASPAR yes 35956647
chr1 229197373 229197394 ZNF263 JASPAR yes 35956648
chr1 229197374 229197395 ZNF263 JASPAR yes 35956651
chr1 229197377 229197398 ZNF263 JASPAR yes 35956652
chr1 229197378 229197386 EHF JASPAR yes 35956654
chr1 229197382 229197387 ETS2 TRANSFAC yes 35956655
Genes associated with rs540550442[chr1:229197386], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More