EnhancerDB
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  3. rs540552142[chr5:149854120]
Enhancers that have rs540552142[chr5:149854120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149834702 149859546 enh8799
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540552142[chr5:149854120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149853703 149854122 EP300 UCSC Txn Factor no Conserved 108536990
chr5 149854110 149854131 ZNF263 JASPAR yes 66882687
chr5 149854114 149854135 IRF1 JASPAR yes 66882689
chr5 149854118 149854139 IRF1 JASPAR yes 66882690
chr5 149854118 149854139 ZNF263 JASPAR yes 66882691
Genes associated with rs540552142[chr5:149854120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More