EnhancerDB
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  3. rs540562077[chr12:94096766]
Enhancers that have rs540562077[chr12:94096766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 94088325 94110497 enh29875
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs540562077[chr12:94096766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 94096753 94096774 IRF1 JASPAR yes 122872534
chr12 94096755 94096766 FLI1 JASPAR yes 122872535
chr12 94096757 94096771 STAT1 JASPAR yes 122872537
chr12 94096757 94096772 PRDM1 JASPAR yes 122872538
chr12 94096757 94096772 STAT2 JASPAR yes 122872539
chr12 94096758 94096770 IRF1 JASPAR yes 122872540
chr12 94096762 94096768 TCF4 TRANSFAC yes 122872541
Genes associated with rs540562077[chr12:94096766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More