EnhancerDB
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  3. rs540563258[chr14:68993855]
Enhancers that have rs540563258[chr14:68993855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 68966045 68996495 enh15715
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540563258[chr14:68993855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 68993841 68993861 RREB1 JASPAR yes 116228691
chr14 68993842 68993856 IRF7 JASPAR yes 116228692
chr14 68993844 68993856 IRF1 JASPAR yes 116228693
chr14 68993844 68993859 FOXP1 JASPAR yes 116228694
chr14 68993845 68993866 IRF1 JASPAR yes 116228695
chr14 68993846 68993866 RREB1 JASPAR yes 116228696
chr14 68993851 68993872 IRF1 JASPAR yes 116228697
chr14 68993853 68993868 IRF9 JASPAR yes 116228698
chr14 68993854 68993868 IRF7 JASPAR yes 116228699
chr14 68993854 68993868 IRF8 JASPAR yes 116228700
chr14 68993855 68993869 STAT1 JASPAR yes 116228701
chr14 68993855 68993870 STAT2 JASPAR yes 116228702
Genes associated with rs540563258[chr14:68993855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More