EnhancerDB
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  3. rs540575521[chr2:26291732]
Enhancers that have rs540575521[chr2:26291732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr2 26291590 26291772 vista30750
VISTA
Transcript factors that have rs540575521[chr2:26291732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26291327 26291971 GATA2 UCSC Txn Factor no Conserved 108431434
chr2 26291338 26291861 GATA1 UCSC Txn Factor no Conserved 108431435
chr2 26291440 26291896 JUND UCSC Txn Factor no Conserved 108431436
chr2 26291477 26291839 EP300 UCSC Txn Factor no Conserved 108431437
chr2 26291483 26291816 BACH1 UCSC Txn Factor no Conserved 108431438
chr2 26291496 26291739 TEAD4 UCSC Txn Factor no Conserved 108431439
chr2 26291510 26291756 TAL1 UCSC Txn Factor no Conserved 108431440
chr2 26291512 26291840 MAFK UCSC Txn Factor no Conserved 108431441
chr2 26291526 26291790 RUNX3 UCSC Txn Factor no Conserved 108431442
chr2 26291534 26291752 MAFF UCSC Txn Factor no Conserved 108431443
chr2 26291534 26291794 FOSL2 UCSC Txn Factor no Conserved 108431444
chr2 26291555 26291748 BATF UCSC Txn Factor no Conserved 108431445
chr2 26291725 26291739 TCF7L2 JASPAR yes 22020959
chr2 26291725 26291739 TCF7L2 JASPAR yes 72521726
chr2 26291725 26291740 LEF1 JASPAR yes 22020960
chr2 26291725 26291740 LEF1 JASPAR yes 72521727
chr2 26291729 26291735 TCF4 TRANSFAC yes 22020961
chr2 26291729 26291735 TCF4 TRANSFAC yes 72521728
Genes associated with rs540575521[chr2:26291732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More