EnhancerDB
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  3. rs540578480[chr6:42376059]
Enhancers that have rs540578480[chr6:42376059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540578480[chr6:42376059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42376055 42376066 FOXB1 JASPAR yes 101718815
chr6 42376059 42376067 FOXL1 JASPAR yes 101718816
chr6 42376059 42376070 FOXB1 JASPAR yes 101718817
Genes associated with rs540578480[chr6:42376059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More