EnhancerDB
  1. Home
  2. SNP
  3. rs540588084[chr1:27891819]
Enhancers that have rs540588084[chr1:27891819]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs540588084[chr1:27891819]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27891800 27891820 ESR1 JASPAR yes 27709812
chr1 27891800 27891820 ESR1 JASPAR yes 118258481
chr1 27891803 27891821 ESR1 JASPAR yes 27709813
chr1 27891803 27891821 ESR1 JASPAR yes 118258482
chr1 27891805 27891825 ESR1 JASPAR yes 27709814
Genes associated with rs540588084[chr1:27891819], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More