EnhancerDB
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  3. rs540604881[chr6:138098945]
Enhancers that have rs540604881[chr6:138098945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138080385 138107115 enh9377
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Thymus Stomach
Transcript factors that have rs540604881[chr6:138098945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138098521 138099096 GATA2 UCSC Txn Factor no Conserved 108541855
chr6 138098938 138098951 SMAD2 JASPAR yes 105675052
Genes associated with rs540604881[chr6:138098945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More