EnhancerDB
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  3. rs540617495[chr1:224699892]
Enhancers that have rs540617495[chr1:224699892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540617495[chr1:224699892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224699876 224699897 IRF1 JASPAR yes 35709179
chr1 224699877 224699892 FOXP1 JASPAR yes 35709180
chr1 224699880 224699895 PRDM1 JASPAR yes 35709181
chr1 224699880 224699895 STAT2 JASPAR yes 35709182
Genes associated with rs540617495[chr1:224699892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More