EnhancerDB
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  3. rs540619941[chr2:239350762]
Enhancers that have rs540619941[chr2:239350762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 239345575 239352887 enh59039
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Heart
Transcript factors that have rs540619941[chr2:239350762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 239350751 239350767 SOX8 JASPAR yes 82169417
chr2 239350756 239350777 IRF1 JASPAR yes 82169418
chr2 239350757 239350778 IRF1 JASPAR yes 82169419
chr2 239350759 239350780 IRF1 JASPAR yes 82169420
chr2 239350761 239350776 FOXP1 JASPAR yes 82169421
chr2 239350762 239350777 FOXP1 JASPAR yes 82169422
Genes associated with rs540619941[chr2:239350762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More