EnhancerDB
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  3. rs540627049[chr16:68775723]
Enhancers that have rs540627049[chr16:68775723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs540627049[chr16:68775723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68775723 68775733 MAX JASPAR yes 11220658
chr16 68775723 68775734 USF2 JASPAR yes 11220659
chr16 68775723 68775735 HES5 JASPAR yes 11220660
chr16 68775723 68775735 HES7 JASPAR yes 11220661
Genes associated with rs540627049[chr16:68775723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More