EnhancerDB
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  3. rs540627753[chr17:25818062]
Enhancers that have rs540627753[chr17:25818062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540627753[chr17:25818062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25818057 25818069 TAL1 JASPAR yes 53636345
chr17 25818058 25818070 BHLHE23 JASPAR yes 53636346
chr17 25818059 25818069 BHLHE22 JASPAR yes 53636347
chr17 25818059 25818069 NEUROD2 JASPAR yes 53636348
chr17 25818059 25818069 OLIG1 JASPAR yes 53636349
chr17 25818059 25818069 OLIG2 JASPAR yes 53636350
chr17 25818059 25818069 OLIG3 JASPAR yes 53636351
chr17 25818062 25818074 POU3F1 JASPAR yes 53636352
chr17 25818062 25818074 POU3F2 JASPAR yes 53636353
chr17 25818062 25818075 POU2F2 JASPAR yes 53636354
Genes associated with rs540627753[chr17:25818062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More