EnhancerDB
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  3. rs540638007[chr6:25163892]
Enhancers that have rs540638007[chr6:25163892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs540638007[chr6:25163892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25163882 25163893 ETV2 JASPAR yes 100829868
chr6 25163883 25163893 ETS1 JASPAR yes 100829869
chr6 25163883 25163894 FLI1 JASPAR yes 100829870
chr6 25163888 25163901 SCRT2 JASPAR yes 100829871
chr6 25163888 25163903 SCRT1 JASPAR yes 100829872
chr6 25163892 25163901 SNAI2 JASPAR yes 100829873
chr6 25163892 25163902 FIGLA JASPAR yes 100829874
chr6 25163892 25163902 ID4 JASPAR yes 100829875
chr6 25163892 25163902 MSC JASPAR yes 100829876
chr6 25163892 25163902 MYF6 JASPAR yes 100829877
chr6 25163892 25163902 TCF3 JASPAR yes 100829878
chr6 25163892 25163902 TCF4 JASPAR yes 100829879
Genes associated with rs540638007[chr6:25163892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More