EnhancerDB
  1. Home
  2. SNP
  3. rs540640003[chr1:224647999]
Enhancers that have rs540640003[chr1:224647999]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224633023 224649015 enh12718
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540640003[chr1:224647999]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224647996 224648008 BHLHE23 JASPAR yes 35705014
chr1 224647997 224648007 BHLHE22 JASPAR yes 35705015
chr1 224647997 224648007 NEUROD2 JASPAR yes 35705016
chr1 224647997 224648007 NEUROG2 JASPAR yes 35705017
chr1 224647997 224648007 OLIG1 JASPAR yes 35705018
chr1 224647997 224648007 OLIG2 JASPAR yes 35705019
chr1 224647997 224648007 OLIG3 JASPAR yes 35705020
chr1 224647997 224648009 TAL1 JASPAR yes 35705021
Genes associated with rs540640003[chr1:224647999], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More