EnhancerDB
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  3. rs540675389[chr12:116926771]
Enhancers that have rs540675389[chr12:116926771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs540675389[chr12:116926771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116926766 116926776 HOXA13 JASPAR yes 124001537
chr12 116926767 116926771 YY1 TRANSFAC yes 124001538
chr12 116926770 116926776 TBP TRANSFAC yes 124001539
chr12 116926770 116926781 PROP1 JASPAR yes 124001540
Genes associated with rs540675389[chr12:116926771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More