EnhancerDB
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  3. rs540682042[chr17:57934163]
Enhancers that have rs540682042[chr17:57934163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540682042[chr17:57934163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57933439 57934227 ZNF143 GTRD no Epithelial (MCF-7) 21776955
chr17 57933439 57934227 ZNF143 GTRD no Epithelial (MCF-7) 107689048
chr17 57934159 57934169 NEUROD2 JASPAR yes 55089810
Genes associated with rs540682042[chr17:57934163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More