EnhancerDB
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  3. rs540689392[chr6:89746527]
Enhancers that have rs540689392[chr6:89746527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 89740389 89749515 enh23409
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs540689392[chr6:89746527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 89746519 89746532 SMAD2 JASPAR yes 103390483
chr6 89746526 89746541 SCRT1 JASPAR yes 103390484
chr6 89746527 89746537 ID4 JASPAR yes 103390485
chr6 89746527 89746537 TCF3 JASPAR yes 103390486
chr6 89746527 89746537 TCF4 JASPAR yes 103390487
Genes associated with rs540689392[chr6:89746527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More