EnhancerDB
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  3. rs540695011[chr2:23700476]
Enhancers that have rs540695011[chr2:23700476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 23699365 23712815 enh18339
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs540695011[chr2:23700476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 23700470 23700480 NFIA JASPAR yes 72366001
chr2 23700471 23700480 NFIX JASPAR yes 72366002
chr2 23700472 23700478 NFIC JASPAR yes 72366003
chr2 23700472 23700486 TLX1 JASPAR yes 72366004
Genes associated with rs540695011[chr2:23700476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More