EnhancerDB
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  3. rs540702977[chr19:6110355]
Enhancers that have rs540702977[chr19:6110355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs540702977[chr19:6110355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 21844676
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377211
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377212
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 21844682
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377225
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377226
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 21844690
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377247
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377248
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 21844740
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 108377374
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 21844741
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 108377375
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 21844742
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 108377376
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 21844743
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 108377377
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 21844744
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 108377378
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 21844745
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 108377379
chr19 6110344 6110358 PLAG1 JASPAR yes 112258781
chr19 6110345 6110355 SP1 JASPAR yes 112258783
chr19 6110348 6110358 SP1 JASPAR yes 112258784
chr19 6110350 6110355 SP1 TRANSFAC yes 112258785
chr19 6110350 6110356 SP1 TRANSFAC yes 112258786
chr19 6110350 6110357 SP1 TRANSFAC yes 112258787
chr19 6110351 6110361 ZNF740 JASPAR yes 112258788
chr19 6110353 6110363 ZNF740 JASPAR yes 112258789
Genes associated with rs540702977[chr19:6110355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More