EnhancerDB
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  3. rs540705683[chr1:201724861]
Enhancers that have rs540705683[chr1:201724861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs540705683[chr1:201724861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201724851 201724866 HSF1 JASPAR yes 34529198
chr1 201724861 201724876 PRDM1 JASPAR yes 34529199
chr1 201724861 201724876 STAT2 JASPAR yes 34529200
chr1 201724861 201724879 IRF2 JASPAR yes 34529201
Genes associated with rs540705683[chr1:201724861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More